PerMed FH - Personalising diagnosis and treatment for Familial Hypercholeserolaemia patients

Glossary of Terms

A central resource for understanding key terminology used throughout the project.

Term Definition
ACMG (American College of Medical Genetics and Genomics) A professional organization that sets standards and guidelines for interpreting genetic information in medicine.
APOB (Apolipoprotein B) A key protein in the blood that helps carry cholesterol and other fats through the body.
Array A laboratory tool that tests many genes or DNA segments at once to find variations or patterns.
Assay A laboratory test used to measure or detect a specific biological substance.
Autosomal Refers to any of the chromosomes that are not sex chromosomes (X or Y).
Binding The process of one molecule attaching to another, often like a key fitting into a lock.
Biomarker A measurable substance in the body that indicates a normal process, disease, or response to treatment.
cDNA (complementary DNA) A form of DNA made from messenger RNA, used to study gene activity.
Cis/trans Terms that describe whether two genetic variants are on the same chromosome (cis) or on opposite ones (trans).
Chip A small device used in genetic testing that can analyze thousands of DNA variants at once.
Cholesterol A fatty substance in the blood that is essential for building cells but can cause problems if levels are too high.
ClinGen (Clinical Genome Resource) A global project that collects and shares information about how genetic variants relate to health.
ClinVar A public database that stores information about the relationships between genes and diseases.
Coding Refers to the parts of DNA that contain instructions for making proteins.
Codon A sequence of three DNA or RNA bases that codes for a single amino acid in a protein.
Cytometry A technique for measuring physical and chemical properties of cells, often using lasers.
Delphi study A structured method of gathering expert opinions to reach agreement on complex topics.
Disorder A condition in which normal bodily functions are disrupted, often due to genetic or environmental causes.
Dominant Describes a gene variant that shows its effect even when only one copy is present.
ELISA (Enzyme-Linked Immunosorbent Assay) A common lab test used to detect proteins, antibodies, or hormones in a sample.
Exons The coding sections of a gene that carry the instructions for making proteins.
FH (Familial Hypercholesterolaemia) An inherited condition that causes very high cholesterol levels and increases the risk of heart disease.
FH VCEP (Familial Hypercholesterolaemia Variant Curation Expert Panel) A group of specialists that reviews and classifies genetic variants linked to FH.
Functional Describes a test or effect that shows how a gene or protein actually works in the body.
Genetic Relating to genes or heredity - how traits and conditions are passed from parents to children.
Genomic Referring to the entire set of genes (the genome) and how they interact and function together.
Heterozygous Having two different versions (alleles) of a gene, one from each parent.
Heterologous Coming from a different source or species; often used when referring to proteins or DNA used in lab experiments.
Homozygous Having two identical versions (alleles) of a gene.
Hypercholesterolaemia A condition where cholesterol levels in the blood are higher than normal.
Hypocholesterolaemia A condition where cholesterol levels in the blood are lower than normal.
Indels Small insertions or deletions of DNA bases in a gene sequence.
LDLR (Low-Density Lipoprotein Receptor) A protein that helps remove “bad” cholesterol (LDL) from the blood.
Lipid A type of fat or fat-like molecule that’s important for energy storage and cell structure.
Luciferase An enzyme that produces light and is often used in lab tests to measure gene activity.
Meiosis A special type of cell division that creates eggs and sperm, each with half the normal number of chromosomes.
Minigene A simplified version of a gene used in lab experiments to study how it functions.
Missense A type of genetic variant that changes one amino acid in a protein.
mRNA (messenger RNA) The molecule that carries genetic instructions from DNA to make proteins.
Nonsense A type of genetic variant that creates a premature stop signal, leading to a shortened, non-functional protein.
Normolipidemics People with normal levels of lipids (fats) in their blood.
Pathogenic Describes a variant or microorganism that causes disease.
Phenotype The visible or measurable traits of an organism, shaped by genes and environment.
PCSK9 (Proprotein Convertase Subtilisin/Kexin Type 9) A protein that controls how much LDL receptor is available to clear cholesterol from the blood.
PM (Personalised Medicine) A medical approach that tailors treatment and prevention to an individual’s genetic makeup.
Promoters DNA regions that control when and how much a gene is turned on.
PS3 Criterion A guideline used by genetic experts to classify variants based on strong laboratory evidence of their effect.
Sequenced When the order of DNA bases in a gene or genome has been determined.
Semidominant Describes a gene where having one copy of a variant causes a milder effect than having two.
Silent (variants) DNA changes that do not alter the resulting amino acid or protein function.
Splicing The process of cutting and joining RNA pieces to form a final message for making a protein.
SP1 A protein that binds to DNA to help control gene activity.
SREBP1/2 (Sterol Regulatory Element-Binding Proteins 1 and 2) Proteins that help regulate how the body makes and processes cholesterol and fats.
Statins Medicines that lower cholesterol by blocking an enzyme needed for its production.
Translation The process by which cells use mRNA instructions to build proteins.
Transcription The first step of gene expression, where DNA is copied into mRNA.
uAUG (Upstream AUG) A start signal found before the main coding region of a gene that can affect protein production.
Uptake The process of taking substances (like cholesterol) into cells.
5′UTRs (5′ Untranslated Regions) Sections of a gene before the coding region that help control how a protein is made.
Variants (gene) Changes in the DNA sequence that can affect how a gene works.
VUS (Variant of Uncertain Significance) A genetic change whose impact on health is not yet known.
Wildtype The normal, most common version of a gene found in the general population.
The project leading to these results has received funding from “la Caixa” Foundation and FCT, I.P. under the project code: LCF/PR/HP23/52330032. Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the "la Caixa" Foundation or the FCT. Neither "la Caixa" Foundation nor the FCT can be held responsible for them.
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